$53+ Flights from Southeast Asia to Kota Kinabalu - Compare & Save Big | Cheapflights

Cheap flight deals from Southeast Asia to Kota Kinabalu

Round-trip from	$86
One-way from	$53

Malaysia Airlines

Malaysia Airlines
13/6-17/6
Nonstop
5h 20m total
Southeast Asia to Kota Kinabalu

Malaysia Airlines

Malaysia Airlines
6/8
Nonstop
2h 40m total
Southeast Asia to Kota Kinabalu

Find flight deals from Southeast Asia to Kota Kinabalu

Cheapest flights from Southeast Asia to Kota Kinabalu
Explore the most affordable flight options available from Southeast Asia to Kota Kinabalu. Find the lowest fares from popular airlines and budget airlines, with prices last updated on 25 April 2025.

Fri 13/606:25KUL - BKI

1 stop13h 35mAirAsia

Tue 17/623:25BKI - KUL

Nonstop2h 30mAirAsia

Deal found 24/4$121

Fri 16/522:00KUL - BKI

Nonstop2h 40mMalaysia Airlines

Tue 27/505:20BKI - KUL

Nonstop2h 40mMalaysia Airlines

Deal found 25/4$155

Fri 27/617:40SIN - BKI

Nonstop2h 25mAirAsia

Mon 30/614:45BKI - SIN

Nonstop2h 25mAirAsia

Deal found 25/4$161

Fri 9/519:00KUL - BKI

Nonstop2h 30mBatik Air

Sun 11/507:00BKI - KUL

Nonstop2h 30mBatik Air

Deal found 24/4$166

Sun 29/617:40SIN - BKI

Nonstop2h 25mMultiple Airlines

Mon 30/617:20BKI - SIN

1 stop6h 20mMultiple Airlines

Deal found 24/4$182

Thu 15/510:20SIN - BKI

1 stop11h 10mBatik Air

Mon 19/507:00BKI - SIN

1 stop26h 20mBatik Air

Deal found 24/4$360

Mon 19/509:55SIN - BKI

1 stop5h 40mMalaysia Airlines

Mon 19/522:20BKI - SIN

1 stop11h 55mMalaysia Airlines

Deal found 25/4$423

Thu 12/602:20KUL - BKI

1 stop16h 00mMultiple Airlines

Tue 17/622:20BKI - KUL

Nonstop2h 40mMultiple Airlines

Deal found 24/4$511

Mon 12/502:15SIN - BKI

1 stop20h 25mT'way Air

Wed 21/523:40BKI - SIN

1 stop25h 05mT'way Air

Deal found 25/4$628

Mon 9/617:00SIN - BKI

Nonstop2h 25mScoot

Mon 16/620:25BKI - SIN

Nonstop2h 20mScoot

Deal found 25/4$677

Sun 17/802:20SIN - BKI

1 stop21h 10mJeju Air

Wed 20/800:30BKI - SIN

1 stop24h 50mJeju Air

Deal found 25/4$911

Thu 19/600:20SIN - BKI

2 stops21h 15mPhilippine Airlines

Tue 24/622:20BKI - SIN

2 stops25h 00mPhilippine Airlines

Deal found 25/4$951

Best flights from Southeast Asia to Kota Kinabalu
Discover carefully curated flight deals from Southeast Asia to Kota Kinabalu that have cost, travel time, and stopovers in mind to ensure you get the best travel experience. Data last updated 25 April 2025.

Fri 13/621:00KUL - BKI

Nonstop2h 40mMalaysia Airlines

Tue 17/622:20BKI - KUL

Nonstop2h 40mMalaysia Airlines

Deal found 24/4$86

Sun 15/612:55KUL - BKI

Nonstop2h 40mMultiple Airlines

Thu 19/606:00BKI - KUL

1 stop15h 50mMultiple Airlines

Deal found 25/4$113

Fri 13/606:25KUL - BKI

1 stop13h 35mAirAsia

Tue 17/623:25BKI - KUL

Nonstop2h 30mAirAsia

Deal found 24/4$121

Fri 9/519:00KUL - BKI

Nonstop2h 30mBatik Air

Sun 11/507:00BKI - KUL

Nonstop2h 30mBatik Air

Deal found 24/4$166

Fri 27/617:40SIN - BKI

Nonstop2h 25mAirAsia

Mon 30/614:45BKI - SIN

Nonstop2h 25mAirAsia

Deal found 25/4$161

Sun 29/617:40SIN - BKI

Nonstop2h 25mMultiple Airlines

Mon 30/617:20BKI - SIN

1 stop6h 20mMultiple Airlines

Deal found 24/4$182

Mon 12/502:15SIN - BKI

1 stop20h 25mT'way Air

Wed 21/523:40BKI - SIN

1 stop25h 05mT'way Air

Deal found 25/4$628

Mon 9/617:00SIN - BKI

Nonstop2h 25mScoot

Mon 16/620:25BKI - SIN

Nonstop2h 20mScoot

Deal found 25/4$677

Thu 15/510:20SIN - BKI

1 stop11h 10mBatik Air

Mon 19/507:00BKI - SIN

1 stop26h 20mBatik Air

Deal found 24/4$360

Mon 19/506:20SIN - BKI

1 stop5h 35mMalaysia Airlines

Mon 19/515:00BKI - SIN

1 stop5h 25mMalaysia Airlines

Deal found 24/4$423

Sun 17/802:20SIN - BKI

1 stop21h 10mJeju Air

Wed 20/800:30BKI - SIN

1 stop24h 50mJeju Air

Deal found 25/4$911

Thu 19/600:20SIN - BKI

2 stops21h 15mPhilippine Airlines

Tue 24/622:20BKI - SIN

2 stops25h 00mPhilippine Airlines

Deal found 25/4$951

Direct flights from Southeast Asia to Kota Kinabalu
Explore direct flight options from Southeast Asia to Kota Kinabalu based on user searches, and compare prices and availability for your desired travel dates. Data last updated 25 April 2025.

Fri 13/621:00KUL - BKI

Nonstop2h 40mMalaysia Airlines

Tue 17/622:20BKI - KUL

Nonstop2h 40mMalaysia Airlines

Deal found 24/4$86

Fri 27/617:40SIN - BKI

Nonstop2h 25mAirAsia

Mon 30/614:45BKI - SIN

Nonstop2h 25mAirAsia

Deal found 25/4$161

Fri 9/519:00KUL - BKI

Nonstop2h 30mBatik Air

Sun 11/507:00BKI - KUL

Nonstop2h 30mBatik Air

Deal found 24/4$166

Mon 9/617:00SIN - BKI

Nonstop2h 25mScoot

Mon 16/620:25BKI - SIN

Nonstop2h 20mScoot

Deal found 25/4$677

Last-minute flights from Southeast Asia to Kota Kinabalu
Discover last-minute flight deals from Southeast Asia to Kota Kinabalu. Data last updated 25 April 2025 and is based on user searches.

Sat 3/520:10KUL - BKI

Nonstop2h 45mMalaysia Airlines

Sun 18/520:35BKI - KUL

1 stop10h 50mMalaysia Airlines

Deal found 24/4$202

Sun 4/507:30KUL - BKI

Nonstop2h 30mBatik Air

Sat 17/511:35BKI - KUL

1 stop23h 55mBatik Air

Deal found 24/4$235

Fri 9/519:00KUL - BKI

Nonstop2h 30mBatik Air

Sun 11/507:00BKI - KUL

Nonstop2h 30mBatik Air

Deal found 24/4$166

Sat 10/518:15SIN - BKI

1 stop16h 15mMultiple Airlines

Mon 12/522:55BKI - SIN

1 stop12h 20mMultiple Airlines

Deal found 24/4$285

Sat 10/512:10SIN - BKI

Nonstop2h 30mAirAsia

Mon 12/522:00BKI - SIN

1 stop9h 15mAirAsia

Deal found 24/4$338

Mon 12/502:15SIN - BKI

1 stop20h 25mT'way Air

Wed 21/523:40BKI - SIN

1 stop25h 05mT'way Air

Deal found 25/4$628

Thu 15/510:20SIN - BKI

1 stop11h 10mBatik Air

Mon 19/507:00BKI - SIN

1 stop26h 20mBatik Air

Deal found 24/4$360

Fri 16/522:00KUL - BKI

Nonstop2h 40mMalaysia Airlines

Tue 27/505:20BKI - KUL

Nonstop2h 40mMalaysia Airlines

Deal found 25/4$155

Sun 18/500:20SIN - BKI

2 stops18h 00mPhilippine Airlines

Mon 19/522:20BKI - SIN

2 stops39h 00mPhilippine Airlines

Deal found 24/4$985

Mon 19/506:20SIN - BKI

1 stop5h 35mMalaysia Airlines

Mon 19/515:00BKI - SIN

1 stop5h 25mMalaysia Airlines

Deal found 24/4$423

One-way flights from Southeast Asia to Kota Kinabalu
Search for one-way flight options from Southeast Asia to Kota Kinabalu. Find affordable one-way fares based on user searches. Data last updated 25 April 2025.

Wed 6/822:00KUL - BKI

Nonstop2h 40mMalaysia Airlines

Deal found 25/4$53

Thu 29/507:30KUL - BKI

Nonstop2h 30mBatik Air

Deal found 25/4$88

Thu 31/706:20SIN - BKI

1 stop5h 35mMalaysia Airlines

Deal found 25/4$232

Thu 15/517:10SIN - BKI

1 stop23h 50mBatik Air

Deal found 25/4$233

Sat 6/902:20SIN - BKI

1 stop21h 10mJeju Air

Deal found 25/4$453

Tue 17/600:20SIN - BKI

2 stops15h 15mPhilippine Airlines

Deal found 24/4$608

Cheapflights Fare Finder

Use the filters below to find and compare flights from Southeast Asia to Kota Kinabalu that are best for you.

Fly from

Fly to

Route

Depart

Return

Price

Kuala LumpurKota Kinabalu

KUL - BKI

KULBKI

Kuala Lumpur Intl

Fri 13/6

06:25-08:50

1 stop26h 25m

Kota Kinabalu

Tue 17/6

17:10-16:40

1 stop23h 30m

$125

Kuala LumpurKota Kinabalu

KUL - BKI

KULBKI

Kuala Lumpur Intl

Fri 16/5

22:00-00:40

Nonstop2h 40m

Kota Kinabalu

Tue 27/5

05:20-08:00

Nonstop2h 40m

$155

SingaporeKota Kinabalu

SIN - BKI

SINBKI

Singapore Changi

Fri 27/6

17:40-20:05

Nonstop2h 25m

Kota Kinabalu

Mon 30/6

14:45-17:10

Nonstop2h 25m

$161

Kuala LumpurKota Kinabalu

KUL - BKI

KULBKI

Kuala Lumpur Intl

Fri 9/5

19:00-21:30

Nonstop2h 30m

Kota Kinabalu

Sun 11/5

07:00-09:30

Nonstop2h 30m

$166

SingaporeKota Kinabalu

SIN - BKI

SINBKI

Singapore Changi

Sun 29/6

17:40-20:05

Nonstop2h 25m

Kota Kinabalu

Mon 30/6

17:20-23:40

1 stop6h 20m

$182

SingaporeKota Kinabalu

SIN - BKI

SINBKI

Singapore Changi

Thu 15/5

10:20-21:30

1 stop11h 10m

Kota Kinabalu

Mon 19/5

07:00-09:20

1 stop26h 20m

$360

SingaporeKota Kinabalu

SIN - BKI

SINBKI

Singapore Changi

Mon 19/5

06:20-11:55

1 stop5h 35m

Kota Kinabalu

Mon 19/5

15:00-20:25

1 stop5h 25m

$423

Kuala LumpurKota Kinabalu

KUL - BKI

KULBKI

Kuala Lumpur Intl

Thu 12/6

02:20-18:20

1 stop16h 00m

Kota Kinabalu

Tue 17/6

22:20-01:00

Nonstop2h 40m

$511

SingaporeKota Kinabalu

SIN - BKI

SINBKI

Singapore Changi

Mon 12/5

02:15-22:40

1 stop20h 25m

Kota Kinabalu

Wed 21/5

23:40-00:45

1 stop25h 05m

$628

SingaporeKota Kinabalu

SIN - BKI

SINBKI

Singapore Changi

Mon 9/6

17:00-19:25

Nonstop2h 25m

Kota Kinabalu

Mon 16/6

20:25-22:45

Nonstop2h 20m

$677

Flights are sorted by cheapest return flights first.

Deals found on 25/4

Showing 1-10 of 20 results

1

2

Best time to book a flight from Southeast Asia to Kota Kinabalu

Have a flexible travel schedule? Discover the best time to fly to Kota Kinabalu from Southeast Asia with our price prediction graph.

Estimated return price

Rates are based on past data. Find the cheapest month and day to book your flight based on your travel requirements, then search for cheap deals.

Cheapflights Insights

Everything you need to know about your flight from Southeast Asia to Kota Kinabalu

What is the cheapest month to book a flight from Southeast Asia to Kota Kinabalu?

Currently, March is the cheapest month in which you can book a flight from Southeast Asia to Kota Kinabalu (average of $423). Flying from Southeast Asia to Kota Kinabalu in December is currently the most expensive (average of $821). There are several factors that can impact the price of a flight, so comparing airlines, departure airports and flight times can provide users with more options.

What is the cheapest time of day to fly from YJX to BKI?

When flying from Southeast Asia to Kota Kinabalu, the time of day you decide to fly out makes little to no difference towards the overall price you’ll pay on tickets.

Rainfall in Kota Kinabalu by month

In terms of precipitation, rainfall in Kota Kinabalu ranges from 60.0 - 351.0 inches per month. October is typically the wettest month, when rainfall can reach 351.0 mm. February is typically the driest time to visit Kota Kinabalu when rainfall is around 60.0 mm.

Temperature in Kota Kinabalu by month

If weather is an important factor for your trip to Kota Kinabalu, use this chart to help with planning. For those seeking warmer temperatures, April is the ideal time of year to visit, when temperatures reach an average of 27.0 C. Travellers hoping to avoid the cold should look outside of January, when temperatures are typically at their lowest (around 26.0 C).

Reviews of airlines servicing Kota Kinabalu

See what other customers who have flown with China Southern, Malaysia Airlines and Philippine Airlines from Southeast Asia to Kota Kinabalu have to say. Users can see the overall rating for each airline as well as how each is rated in terms of entertainment options, comfort, food, crew/service, and boarding process.

7.5

Good

Reviews

1 / 2

10.0

Excellent

Haris,Mar 2025

MNL - CAN

Aircraft staff was very nice, have a great services, much cooperative.

7.5

Good

7.5

Good

Reviews

1 / 2

10.0

Excellent

Haris,Mar 2025

MNL - CAN

Aircraft staff was very nice, have a great services, much cooperative.

Malaysia Airlines

7.3

Good

7.5

Good

Reviews

1 / 2

10.0

Excellent

Haris,Mar 2025

MNL - CAN

Aircraft staff was very nice, have a great services, much cooperative.

Philippine Airlines

7.2

Good

7.5

Good

Reviews

1 / 2

10.0

Excellent

Haris,Mar 2025

MNL - CAN

Aircraft staff was very nice, have a great services, much cooperative.

6.7

Okay

7.5

Good

Reviews

1 / 2

10.0

Excellent

Haris,Mar 2025

MNL - CAN

Aircraft staff was very nice, have a great services, much cooperative.

Related info for your journey

What airport do you fly into for flights to Kota Kinabalu from Southeast Asia?
Located just 5.8 km from the city centre, Kota Kinabalu (BKI) is the airport most travelers will use when flying to Kota Kinabalu from Southeast Asia.
What are the cheapest airlines to fly from Southeast Asia to Kota Kinabalu one-way?
The cheapet airlines for a one-way flight from Southeast Asia to Kota Kinabalu are Malaysia Airlines ($53), Batik Air ($88), and Jeju Air ($453).
Can I find deals for flights from Southeast Asia to Kota Kinabalu that include hotel bookings?
Yes. In addition to deals on Southeast Asia to Kota Kinabalu flights, Cheapflights offers holiday packages that include both flights and hotel.
How can I find direct flights from Southeast Asia to Kota Kinabalu?
After entering your origin and destination, apply the non-stop filter on the search result page to find direct flights from Southeast Asia to Kota Kinabalu.
Can I find deals for business class flights from Southeast Asia to Kota Kinabalu?
Yes. Cheapflights offers flight deals from Southeast Asia to Kota Kinabalu by cabin class. In addition to browsing deals, you can also filter by cabin class on the search results page after making a search.
What is the cheapest month to book a flight from Southeast Asia to Kota Kinabalu?
Currently, March is the cheapest month in which you can book a flight from Southeast Asia to Kota Kinabalu (average of $423). Flying from Southeast Asia to Kota Kinabalu in December is currently the most expensive (average of $821). There are several factors that can impact the price of a flight, so comparing airlines, departure airports and flight times can provide users with more options.

See more FAQs

Browse thousands of different options on Cheapflights for your next trip

Alternative routes for Southeast Asia to Kota Kinabalu

Singapore to Kota Kinabalu flights

Kuala Lumpur Intl to Kota Kinabalu flights

Top 2 airlines flying from Southeast Asia to Kota Kinabalu

Airline	Cheapest	Average	Flexibility	On-time
AirAsia	Cheapest$129	Average$204	FlexibilityNo cancel fee	On-time66%	Search AirAsia flights
Scoot	Cheapest$148	Average$240	FlexibilityNo cancel fee	On-timeN/A	Search Scoot flights

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How does Cheapflights help users find flights from Southeast Asia to Kota Kinabalu?

Deals for Southeast Asia to Kota Kinabalu flights are sourced from 900+ travel sites when you use Cheapflights. When all flight results come back, Cheapflights lets you sort and filter flights using different criteria to choose better, like price, airport, cabin class, and plenty of other options.

Why should you use Cheapflights to find cheap flight tickets from Southeast Asia to Kota Kinabalu?

It’s simple! Cheapflights, which is free to use for everyone, saves millions of users time and money every year by helping them find the cheapest and most suitable flights from Southeast Asia to Kota Kinabalu.

Can Cheapflights find flights from Southeast Asia to Kota Kinabalu with no change fees?

Yes, we can. To see specific flights from Southeast Asia to Kota Kinabalu with no change fees, users can toggle flexible booking options after using the search form above to find flights.

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Yes, and it’s super simple to set up. Click the bell icon next to the flight deals above and provide a valid email address to enable Price Alerts. That’s it!

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